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Genome homology search
Run blast
Run diamond
Blast match
Blast visualization
Synteny inference
MCScanX
ColinearScan
Syntenic visualization
Dupgen finder
Block number count
Evaluation of nucleotide mutation
ParaAT
KaKs_Calculator
KaKs calculate
Homologous dotplot drawing
Blast dotplot
Block dotplot
Ks dotplot
Subgenome fractionation comparison
Correspondence mc
Collinearity generator
Gene retention
Gene loss
P-index
Draw_list_trees
Gene family
Codonw
Cpgfinder
MEME Suite
GSDS
Hmmer
Pfam
Interproscan
Sequence Alignment
FastTree
IQ-Tree
TransFam identifier
Auxiliary Software
Draw_Circos
Species classification
Sequence_screening
Format_conversion
Find_alternative
Duplicate_removal
Extract_column
Files_merge
Deal_stars
Subtree_extractor
WGDI
Block_run
KaKs calculate
Blast dotplot
Ks dotplot
Block_info
Correspondence
JBrowse
Docker image
Browse
Pair-wise dotplots
Collinear and KaKs
Hierarchical alignments
Pvu_syntenic
Vvi_syntenic
Event-related genes
ECH
PCT
CCT
LSH
GST
B-WGD
hybridization Genes
Ancestral genome and evolution
JBrowse
Resource
Genome
Transcriptome
genome introduction
Diagram
Phylogenetic tree
Identification of polyploidy
Bar chart
Heatmap
Polyploidy index
Gene function annotation
Functional genes
Transcription factor
N6-methyladenosine(m6A)
Bar chart
Heatmap
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Identification of polyploidy
Blast function
Sequence alignment between arbitrary species
Diamond
Legume sequence alignment and best match
Fabaceae blast and match
Legume sequence alignment and best match
Blast visualization
Matching visualization
Blastp dotplot
Plotting blastp dotplot diagrams
MCScanX
Syntenic matching tool
ColinearScan
Syntenic matching tool
WGDI-block
Collinearity analysis -WGDI
Block dotplot
Drawing block dotplot function
Synvisio
Collinear visualization module
BLAST function
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